Finished Master projects
The following list (under construction, by no means complete) is meant to give you an impression of what could be achieved during your final project period, and what a thesis in our chair in the specialisation MAGNUS or MDS or AI for Health track could look like.
MSc Students graduated from our chair:
MIA: | (Brune) |
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2025
- Ties Martens
Optimal transport regularization for implicit neural representation of cell shape sequences, 03-07-2025, C. Brune, daily supervisor S. Dummer - Thiadrik Blom
Optimal Transport Regularization of Implicit Neural Representations for Dynamic MRI Reconstruction, 02-07-2025, C. Brune, daily supervisor S. Dummer - Jorn Quattrocchi
Conditional Denoising Diffusion Probabilistic Models for Metal Artifact Reduction in Computed Tomography, 01-07-2025, C. Brune, daily supervisor J. Wolterink - Arnon A.B.
Photoacoustic Image Reconstruction using Continuous Neural Representations, 8 May 2025, C.Brune - Linda ten Klooster
AI-accelerated prediction of optimal implant alignment in total knee arthroplasty, 29 January 2025, C.Brune - Rutger Schrijver
Neurological Prognostication of Postanoxic Coma Patients, 29 January 2025, H.G.E. Meijer
2024
- Thomas Middelkamp
A unifying framework for estimation of the Koopman operator between reproducing kernel Hilbert spaces, 16 December 2024, C. Brune, daily supervisor J.A. Iglesias Martínez - Floor van Maarschalkerwaart
Learning Distributionally Robust Solutions for Inverse Problems using the Wasserstein Distance. 23 July 2024, C. Brune, daily supervisor M. Carioni - Puru Vaish (Mei)
Fourier Insights in Machine Learning: Bridging the Augmentation Gap through Frequency-basis Functions, 7 March 2024, C. Brune (MDS track)
2023
- Tycho de Haan
Neural field and spline-based representations for optimizing the k-space trajectory for MRI with deep learning, 26 October 2023, C. Brune, daily supervisor J.M. Wolterink - Paul Stuiver
Reduced-order surrogate modeling for linear-nonlinear coupled problems, 23 October 2023, C. Brune, daily supervisor M.Guo - Petrov, B.P.
Understanding the Performance of Hyperbolic Graph Neural Networks. September 2023, C. Brune & S. Langer (MDS track) - Irene van de Zande
3D Point-cloud Object Detection for Millimeter Wave Radar: A Synthesis Study, 11 September 2023, C. Brune, daily supervisor M. Guo - Jente van Werven
PDE-Based Graph Convolutional Network for Arterial Hemodynamics Estimation, 28 August 2023, C. Brune, daily supervisor J. Suk (MDS track) - Stephan Lip
Burst-Suppression in Next-Generation Neural Mass Models and EEG, 20 July 2023, H.G.E. Meijer - Fleur van Alphen
Spontanous glutamate and calcium dynamics at the presynamptic terminal, 02 May 2023, Dr. H.G.E. Meijer
2022
- Martijn Heutinck
An application of a proximal method with a fractional Laplacian regularizer for inverse problems,10 January 2023, C. Brune, Daily supervisor: Dr.rer.nat. J.A. Iglesias Martinez - Mariya Karlashchuk
Data-driven model for direct segmentation in medical imaging, 27 September 2022, C. Brune, Daily Supervisor: J. Wolterink (MDS track) - Tjeerd J. Heeringa,
The Effect of Higher Order Activation Functions on Infinitely wide Neural Networks, 25 April 2022, AM: C. Brune, S&C: H.J. Zwart, CS: M. Poel
2021
- Wouter van Harten
Numerical continuation schemes for 1D patterns in neural fields, 14 October 2021, C. Brune, Daily Supervisor: H.G.E. Meijer - Lucas Jansen Klomp
The influence of feedforward inhibition on spontaneous and evoked activity in coupled neural mass models, 16 September 2021, C. Brune, Daily Supervisor: H.G.E. Meijer - Sven Dummer
Neural differential equations solving stochastic mean field games, 13 September 2021, C. Brune - Jesse Zwienenberg
Neural implicit representations for diffeomorphic medical image registration, 30 August 2021, C. Brune (MDS track)
2020
- Pascal Loohuis,
On the importance of mutual coherence for image reconstruction with neural networks, 13 November 2020, C. Brune - Sarah Verboom,
Nonlinear filters and deep learning for removing chest compression artefacts from ECG during cardiac arrest, 22 October 2020, S.A. van Gils - Sophie Ligtenstein
Modelling the effect of cardiac arreston neural activity using an energy-dependent neural mass model basedon ion concentrations, 01 may 2020, S.A. van Gils, Daily Supervisor: H.G.E. Meijer
2018
- Wietske Bastiaansen
Joint reconstruction and motion estimation via nonconvex optimization for dynamic MRI, 16 November 2018, S.A. van Gils - Daily Supervisor: C. Brune - Len Spek
Bifurcations in Neural Field Models with Transmission Delays and Diffusion, 2 November 2018, S.A. van Gils - Xiaoming.P. op de Hoek,
Dynamic objects in emission tomography reconstructed with temporal B-splines. 23 May 2018, S.A. van Gils
2017
- Manu Kalia
Homoclinic saddle to saddle-focus transitions in 4D systems, 10 July 2017, S.A. van Gils - Daily supervisor: H.G.E. Meijer - Niek Huttinga,
Insights into deep learning methods with application to cancer imaging, 23 May 2017 - S.A. Van Gils - Daily supervisor: C. Brune
2016
- Normen Oude Booijink
Parallel magnetic particle imaging: compressed sensing of field free line excitations, 26 oktober 2016 - S.A. Van Gils -
Daily supervisor: C. Brune - Nick Luiken
Solution techniques for inverse problems in neural field theory, Oct 2016 - S.A. Van Gils - Daily supervisor: C. Brune - Youri Boink,
Combined Modelling of Optimal Transport and Segmentation Revealing Vascular Properties, 09 September 2016 - S.A. Van Gils - Daily supervisor: C. Brune
2015
- Rien Lagerwerf,
Higher order variational methods in photoacoustic tomography, 18 september 2015 - Van Gils - Laura van de Weert,
Gap junction coupling in a neural field model, 22 juni 2015 - Van Gils
2014
- Bert Kiewiet,
On the effect of a Gaussian firing rate function and propagation delays on the dynamcis of a network of Wilson- Cowan populations, 16 september 2014 - Van Gils - Daily supervisor: H.G.E. Meijer - Jurgen Hebbink,
Activity types in a neural mass model, 26 September 2014 - van Gils
2013
- Koen Dijkstra,
A Mean Field Reduction of a Spiking Neuron Network, 18 January 2013 - van Gils - Jesper Lansink Rotgerink,
An in silico description of an Alzheimer network , 17 January 2013 - van Gils
2012
- Ivan van der Kroon,
On Faraday Waves and Jets, 30 March 2012 – van Groesen
2011
- Wessel Woldman,
Computational model on neuronal stabilization in perceptual choice dynamics, August 2011 - van Gils - dialy supervisor H.G.E. Meijer
2010
- Arnida L. Latifah,
Maximal and Pseudo-Maximal Wave Concepts for Freak Waves Applied to the Draupner Wave, May 2010 - van Groesen - Franchimon, Ellen
Modelling circular optical microresonators using whispering gallery modes. 2010- van Groesen, daily supervisor M. Hammer
2009
- Wenny Kristina
Slowly varying bathymetry modeled by Effective Boundary Conditions, August 2009 -van Groesen - Sid Visser,
Synchronization-based parameter estimation of Neuronal Networks, June 2009 - van Gils
2008
- L.S. Lie,
An analysis of Extremal Periodic Water Wave Profile, February 2008 - van Groesen
2007
- Sanne T. Smit,
The STN-GPe-network - a bifurcation analysis, 12 October 2007 - van Gils
2006
- Meer, C.H. van der (2006)
Ocean waves of maximal amplitude.-Groesen, daily supervisor G.A.M. Jeurnink
2004
- Sandra Kamphuis,
10 September 2004 - van Groesen
2003
- F. Daniel Hofman,
24 October 2003 - van Gils - Arjen H. Koop,
A Mathematical model for the ecfficacy and toxicity of aminoglycoside, 02 July 2003 - van Gils
2000
- Johannes K. Krottje,
28 June 2000 - van Gils
1999
- Carolien C.J.M. Fluit,
26 June 1999 - van Groesen - H. Martijn Vollebregt,
31 March 1999 - van Groesen - Pieter C Roos,
13 January 1999 - van Groesen
1998
- Judith Dekkers,
19 August 1998 - van Groesen
1997
- Jaap Harm Westhuis,
20 February 1997 - van Groesen