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2026
Article
Energy-stable port-Hamiltonian systems (2026)Applied mathematics letters, 173. Article 109784. Buchfink, P., Glas, S. & Zwart, H.https://doi.org/10.1016/j.aml.2025.109784
2025
Article
Anatomical characteristics are associated with aneurysm sac regression after endovascular repair (2025)Journal of vascular surgery, 82(6), 2023-2035. van Rijswijk, R. E., Leeuwerke, S. J., Alblas, D., Geelkerken, R. H., Reijnen, M. M., Jebbink, E. G. & Wolterink, J. M.https://doi.org/10.1016/j.jvs.2025.07.045Task based evaluation of sparse view CT reconstruction techniques for intracranial hemorrhage diagnosis using an AI observer model (2025)Scientific reports, 15(1). Article 26002. Tivnan, M., Kikkert, I. D., Wu, D., Yang, K., Wolterink, J. M., Li, Q. & Gupta, R.https://doi.org/10.1038/s41598-025-11089-5Towards personalized trocar placement: Assessment of patient-specific abdominal wall distension due to pneumoperitoneum (2025)Journal of robotic surgery, 19(1). Article 607. Gritter, S. T., Baltus, S. C., Gerats, B. G. A., Tan, C. O., Wolterink, J. M. & Broeders, I. A. M. J.https://doi.org/10.1007/s11701-025-02757-9Sparsity for dynamic inverse problems on Wasserstein curves with bounded variation (2025)Inverse problems, 41(11), 115018 (E-pub ahead of print/First online). Carioni, M. & Lohmann, J.https://doi.org/10.1088/1361-6420/ae16ccStudents’ conceptions of double integral bounds: an APOS theory perspective (2025)International Journal of Mathematical Education in Science and Technology (E-pub ahead of print/First online). Craig, T. S. & Pehlivan, L.https://doi.org/10.1080/0020739X.2025.2582624Vector-valued Fourier hyperfunctions and boundary values (2025)Kyoto Journal of Mathematics (E-pub ahead of print/First online). Kruse, K.https://doi.org/10.1215/21562261-2024-0030Deep vectorised operators for pulsatile hemodynamics estimation in coronary arteries from a steady-state prior (2025)Computer methods and programs in biomedicine, 271. Article 108958. Suk, J., Nannini, G., Rygiel, P., Brune, C., Pontone, G., Redaelli, A. & Wolterink, J. M.https://doi.org/10.1016/j.cmpb.2025.108958Model-Order Reduced Full-Wavefield Migration using Proper Orthogonal Decomposition (2025)Geophysical journal international, 243(2), 1-25. Article ggaf356. Hoogerbrugge, L., Khalid, M. H., van Dongen, K. W. A. & Verschuur, D. J.https://doi.org/10.1093/gji/ggaf356Sparsifying Dimensionality Reduction of PDE Solution Data with Bregman Learning (2025)SIAM journal on scientific computing, 47(5), 1033-1058. Heeringa, T. J., Brune, C. & Guo, M.https://doi.org/10.1137/24M1684566Dispersion of backward-propagating waves in a surface defect on a three-dimensional photonic band-gap crystal (2025)Physical review B: Covering condensed matter and materials physics, 112(15), 1553051-15530514. Article 155305. Vreman, T. J., Goodwin, M. J., Corbijn van Willenswaard, L. J., Barnes, W. L., Lagendijk, A. & Vos, W. L.https://doi.org/10.1103/jckd-3l5dContinuous maximal regularity in locally convex spaces (2025)Studia mathematica, 285(1), 41-89. Kruse, K. & Schwenninger, F. L.https://doi.org/10.4064/sm240822-31-7High-order discretized ACMS method for the simulation of finite-size two-dimensional photonic crystals (2025)Computers & mathematics with applications, 196, 376-394. Giammatteo, E., Heinlein, A., Lederer, P. L. & Schlottbom, M.https://doi.org/10.1016/j.camwa.2025.08.013Higher Order Accurate Bounds Preserving Time-Implicit Discretizations for the Chemically Reactive Euler Equations (2025)Communications in computational physics, 38(4), 1017-1052. Yan, F., Van der Vegt, J. J. W., Xia, Y. & Xu, Y.https://doi.org/10.4208/cicp.OA-2023-0115Weak equals strong L2 regularity for partial tangential traces on Lipschitz domains (2025)Journal of mathematical analysis and applications, 550(1). Article 129548. Skrepek, N. & Pauly, D.https://doi.org/10.1016/j.jmaa.2025.129548Limit-case admissibility for positive infinite-dimensional systems (2025)Journal of differential equations, 440. Article 113435. Arora, S., Glück, J., Paunonen, L. & Schwenninger, F. L.https://doi.org/10.1016/j.jde.2025.113435Model Order Reduction for Seismic Applications (2025)SIAM journal on scientific computing, 47(5), B1045 - B1076. Hawkins, R., Khalid, M. H., Schlottbom, M. & Smetana, K.https://doi.org/10.1137/24M1667737Analysis and Systematic Discretization of a Fokker–Planck Equation with Lorentz Force (2025)Computational Methods in Applied Mathematics, 25(4), 807-822. Bosboom, V., Egger, H. & Schlottbom, M.https://doi.org/10.1515/cmam-2025-0061Dirac structure for linear dynamical systems on Sobolev spaces (2025)Journal of mathematical analysis and applications, 549(2). Article 129493. Kumar, N., Zwart, H. J. & van der Vegt, J. J. W.https://doi.org/10.1016/j.jmaa.2025.129493Conditional gradients for total variation regularization with PDE constraints: A graph cuts approach (2025)Computational optimization and applications (E-pub ahead of print/First online). Cristinelli, G., Iglesias, J. A. & Walter, D.https://doi.org/10.1007/s10589-025-00699-4A Kinetic Chemotaxis Model and Its Diffusion Limit in Slab Geometry (2025)Asymptotic analysis, 144(4), 1429-1443. Egger, H., Hellmuth, K., Philippi, N. & Schlottbom, M.https://doi.org/10.1177/09217134251328514Automated surgical workflow recognition in privacy-preserving depth videos of the operating room (2025)Surgical endoscopy, 39(9), 5948-5956. Gerats, B. G. A., Wolterink, J. M. & Broeders, I. A. M. J.https://doi.org/10.1007/s00464-025-12031-6H∞-control for a class of boundary controlled hyperbolic PDEs (2025)IMA journal of mathematical control and information, 42(3). Article dnaf023. Hastir, A., Jacob, B. & Zwart, H.https://doi.org/10.1093/imamci/dnaf023Learning hemodynamic scalar fields on coronary artery meshes: A benchmark of geometric deep learning models (2025)Computers in biology and medicine, 195. Article 110477. Nannini, G., Suk, J., Rygiel, P., Saitta, S., Mariani, L., Maranga, R., Baggiano, A., Pontone, G., Wolterink, J. M. & Redaelli, A.https://doi.org/10.1016/j.compbiomed.2025.110477Pre-contoured Plate Fit Assessment for Acetabular Fractures (2025)Annals of biomedical engineering, 53(9), 2299-2308. Article 103111. van Veldhuizen, W. A., Assink, N., Schuurmann, R. C. L., Firoozabadi, R., ten Duis, K., de Vries, J. P. P. M., Wolterink, J. M. & IJpma, F. F. A.https://doi.org/10.1007/s10439-025-03760-9Identification of models describing gene expression data leveraging machine learning methods (2025)Interface focus, 15(3). Article 20250014. Jansen Klomp, L. F., Queirolo, E., Post, J. N., Meijer, H. G. E. & Brune, C.https://doi.org/10.1098/rsfs.2025.0014Duality for neural networks through Reproducing Kernel Banach Spaces (2025)Applied and Computational Harmonic Analysis, 78. Article 101765. Spek, L., Heeringa, T. J., Schwenninger, F. & Brune, C.https://doi.org/10.1016/j.acha.2025.101765Multitask Deep Learning for Automated Detection of Endoleak at Digital Subtraction Angiography during Endovascular Aneurysm Repair (2025)Radiology: Artificial Intelligence, 7(4). Article e240392. Smorenburg, S. P. M., Hoksbergen, A. W. J., Yeung, K. K. & Wolterink, J. M.https://doi.org/10.1148/ryai.240392On Accelerated Iterative Schemes for Anisotropic Radiative Transfer Using Residual Minimization (2025)SIAM journal on scientific computing, 47(4), B801-B821. Bardin, R. & Schlottbom, M.https://doi.org/10.1137/24M1678398World of Forms: Deformable geometric templates for one-shot surface meshing in coronary CT angiography (2025)Medical image analysis, 103. Article 103582. van Herten, R. L. M., Lagogiannis, I., Wolterink, J. M., Bruns, S., Meulendijks, E. R., Dey, D., de Groot, J. R., Henriques, J. P., Planken, R. N., Saitta, S. & Išgum, I.https://doi.org/10.1016/j.media.2025.103582Evaporating sessile droplets: solutal Marangoni effects overwhelm thermal Marangoni flow (2025)Journal of fluid mechanics, 1013. Article A39. Rocha, D., Lederer, P. L., Dekker, P. J., Marin, A., Lohse, D. & Diddens, C.https://doi.org/10.1017/jfm.2025.10208Fostering the Development of Young Students’ Analytical Thinking by use of a Problem-solving Method (2025)Journal of Research in Science, Mathematics and Technology Education, 8(SI), 377-401. Lanting, L. S.https://doi.org/10.31756/jrsmte.4117SIFault-Tolerant Properties of Scale-Free Linear Protocols for Synchronization of Homogeneous Multiagent Systems (2025)IEEE transactions on automatic control, 70(6), 4194-4201. Stoorvogel, A. A., Saberi, A. A. & Liu, Z.https://doi.org/10.1109/TAC.2025.3536880Second-Order Flows for Approaching Stationary Points of a Class of Nonconvex Energies via Convex-Splitting Schemes (2025)SIAM journal on scientific computing, 47(3), A1604-A1627. Chen, H., Dong, G., Iglesias, J. A., Liu, W. & Xie, Z.https://doi.org/10.1137/24M1681409The Double-Layer Potential for Spectral Constants Revisited (2025)Integral equations and operator theory, 97(2). Article 13. Schwenninger, F. L. & de Vries, J.https://doi.org/10.1007/s00020-025-02800-2Linear-Quadratic Optimal Control for Boundary Controlled Networks of Waves (2025)SIAM journal on control and optimization, 63(3), 1878-1901. Hastir, A., Jacob, B. & Zwart, H.https://doi.org/10.1137/24M1640768Discontinuous Galerkin Finite Element Methods for Linear Port-Hamiltonian Dynamical Systems (2025)Journal of scientific computing, 104(1). Article 8 (E-pub ahead of print/First online). Cheng, X., van der Vegt, J. J. W., Xu, Y. & Zwart, H. J.https://doi.org/10.1007/s10915-025-02926-wA dual notion to BIBO stability (2025)Journal of mathematical analysis and applications, 545(2). Article 129156. Schwenninger, F. & Wierzba, A. A.https://doi.org/10.1016/j.jmaa.2024.129156Deep Learning for Automated Ventricle and Periventricular Space Segmentation on CT and T1CE MRI in Neuro-Oncology Patients (2025)Cancers, 17(10). Article 1598. Wubbels, M., Ribeiro, M., Wolterink, J. M., van Elmpt, W., Compter, I., Hofstede, D., Birimac, N. E., Vaassen, F., Palmgren, K., Hansen, H. H. G., Weide, H. L. v. d., Brouwer, C. L., Kramer, M. C. A., Eekers, D. B. P. & Zegers, C. M. L.https://doi.org/10.3390/cancers17101598Atypical plume-like events contribute to glutamate accumulation in metabolic stress conditions (2025)iScience, 28(4). Article 112256. Ziebarth, T., Pape, N., Nelson, J. S. E., van Alphen, F. I. M., Kalia, M., Meijer, H. G. E., Rose, C. R. & Reiner, A.https://doi.org/10.1016/j.isci.2025.112256Periodic normal forms for bifurcations of limit cycles in DDEs (2025)Journal of differential equations, 423, 631-694. Lentjes, B., Spek, L., Bosschaert, M. M. & Kuznetsov, Y. A.https://doi.org/10.1016/j.jde.2025.01.064Eventually positive semigroups: spectral and asymptotic analysis (2025)Semigroup forum, 110(2), 263-295. Arora, S.https://doi.org/10.1007/s00233-025-10519-0SIRE: Scale-invariant, rotation-equivariant estimation of artery orientations using graph neural networks (2025)Medical image analysis, 101. Article 103467. Alblas, D., Suk, J., Brune, C., Yeung, K. K. & Wolterink, J. M.https://doi.org/10.1016/j.media.2025.103467Multi-Modal Machine Learning for Evaluating the Predictive Value of Pelvimetric Measurements (Pelvimetry) for Anastomotic Leakage After Restorative Low Anterior Resection (2025)Cancers, 17(6). Article 1051. Geitenbeek, R. T. J., Baltus, S. C., Broekman, M., Barendsen, S. N., Frieben, M. C., Asaggau, I., Thibeau-Sutre, E., Wolterink, J. M., Vermeulen, M. C., Tan, C. O., Broeders, I. A. M. J. & Consten, E. C. J.https://doi.org/10.3390/cancers17061051Feasibility of tomographic freehand three-dimensional ultrasound for surveillance of abdominal aortic aneurysms after endovascular repair (2025)Vascular (E-pub ahead of print/First online). van Rijswijk, R. E., Everink, S. R. T., Wolterink, J. M., Reijnen, M. M. P. J. & Groot Jebbink, E.https://doi.org/10.1177/17085381251327171Deep learning-based pelvimetry in pelvic MRI volumes for pre-operative difficulty assessment of total mesorectal excision (2025)Surgical endoscopy, 39(3), 1536-1543. Baltus, S. C., Geitenbeek, R. T. J., Frieben, M., Thibeau-Sutre, E., Wolterink, J. M., Tan, C. O., Vermeulen, M. C., Consten, E. C. J. & Broeders, I. A. M. J.https://doi.org/10.1007/s00464-024-11485-4Periodic Center Manifolds for DDEs in the Light of Suns and Stars (2025)Journal of dynamics and differential equations, 37, 815–858. Lentjes, B., Spek, L., Bosschaert, M. M. & Kuznetsov, Y. A.https://doi.org/10.1007/s10884-023-10289-9Scalable δ-Level Coherent State Synchronization of Multi-Agent Systems with Adaptive Protocols and Bounded Disturbances (2025)International journal of adaptive control and signal processing, 39(3), 497 - 516. Nojavanzadeh, D., Liu, Z., Stoorvogel, A. A. & Saberi, A. A.https://doi.org/10.1002/acs.3953Widespread neuronal chaos induced by slow oscillating currents (2025)Chaos, 35(3). Article 033120. Scully, J., Hinsley, C., Bloom, D., Meijer, H. G. E. & Shilnikov, A. L.https://doi.org/10.1063/5.0248001The algebraic numerical range as a spectral set in Banach algebras (2025)Canadian journal of mathematics (E-pub ahead of print/First online). Blazhko, H., Homza, D., Schwenninger, F. L., de Vries, J. & Wojtylak, M.https://doi.org/10.4153/S0008414X25000124On linearization and uniqueness of preduals (2025)Mathematische Nachrichten (E-pub ahead of print/First online). Kruse, K.https://doi.org/10.1002/mana.202400355Developing Trustworthy Artificial Intelligence Models to Predict Vascular Disease Progression: the VASCUL-AID-RETRO Study Protocol (2025)Journal of Endovascular Therapy (E-pub ahead of print/First online). Rijken, L., Zwetsloot, S., Smorenburg, S., Wolterink, J., Išgum, I., Marquering, H., van Duivenvoorde, J., Ploem, C., Jessen, R., Catarinella, F., Lee, R., Bera, K., Buisan, J., Zhang, P., Dias-Neto, M., Raffort, J., Lareyre, F., Muller, C., Koncar, I., … Yeung, K. K.https://doi.org/10.1177/15266028251313963High-order stochastic integration schemes for the Rosenbluth-Trubnikov collision operator in particle simulations (2025)Journal of computational physics, 527. Article 113811. Lu, Z., Meng, G., Tyranowski, T. & Chankin, A.https://doi.org/10.1016/j.jcp.2025.113811A sparse optimization approach to infinite infimal convolution regularization (2025)Numerische Mathematik, 157(1), 41-96. Bredies, K., Carioni, M., Holler, M., Korolev, Y. & Schönlieb, C. B.https://doi.org/10.1007/s00211-024-01439-2Extremal Points and Sparse Optimization for Generalized Kantorovich–Rubinstein Norms (2025)Foundations of Computational Mathematics, 25(1), 103-144. Carioni, M., Iglesias, J. A. & Walter, D.https://doi.org/10.1007/s10208-023-09634-7Multimodal Artificial Intelligence Model for Prediction of Abdominal Aortic Aneurysm Shrinkage After Endovascular Repair (the ART in EVAR study) (2025)Journal of Endovascular Therapy (E-pub ahead of print/First online). van Rijswijk, R. E., Bogdanovic, M., Roy, J., Yeung, K. K., Zeebregts, C. J., Geelkerken, R. H., Jebbink, E. G., Wolterink, J. M. & Reijnen, M. M. P. J.https://doi.org/10.1177/15266028251314359Waveform-Specific Performance of Deep Learning-Based Super-Resolution for Ultrasound Contrast Imaging (2025)IEEE transactions on ultrasonics, ferroelectrics and frequency control (E-pub ahead of print/First online). Zorgdrager, R., Blanken, N., Wolterink, J. M., Versluis, M. & Lajoinie, G.https://doi.org/10.1109/TUFFC.2025.3537298Deep learning for segmentation of colorectal carcinomas on endoscopic ultrasound (2025)Techniques in coloproctology, 29(1). Article 20. Noort, F. v. d., ter Borg, F., Guitink, A., Faber, J. & Wolterink, J. M.https://doi.org/10.1007/s10151-024-03056-5NeRF-OR: neural radiance fields for operating room scene reconstruction from sparse-view RGB-D videos (2025)International journal of computer assisted radiology and surgery, 20, 147-156. Gerats, B. G. A., Wolterink, J. M. & Broeders, I. A. M. J.https://doi.org/10.1007/s11548-024-03261-5Optimal Transport on the Lie Group of Roto-translations (2025)SIAM journal on imaging sciences, 18(2), 789-821. Bon, D., Pai, G., Bellaard, G., Mula, O. & Duits, R.https://doi.org/10.1137/24M1641531Port-Hamiltonian discontinuous Galerkin finite element methods (2025)IMA Journal of Numerical Analysis, 45(1), 354–403. Kumar, N., van der Vegt, J. J. W. & Zwart, H. J.https://doi.org/10.1093/imanum/drae008Quantitative aortic Na[18F]F positron emission tomography computed tomography as a tool to associate vascular calcification with major adverse cardiovascular events (2025)European journal of nuclear medicine and molecular imaging, 52, 501-509. Lieverse, T. G. F., van Praagh, G. D., Mulder, D. J., Lambers Heerspink, H. J., Wolterink, J. M. & Slart, R. H. J. A.https://doi.org/10.1007/s00259-024-06901-9
Conference contribution
Steerable Anatomical Shape Synthesis with Implicit Neural Representations (2025)In Medical Image Computing and Computer Assisted Intervention , MICCAI 2025 - 28th International Conference, 2025, Proceedings (pp. 630-639) (Lecture Notes in Computer Science; Vol. 15962 LNCS). Springer (E-pub ahead of print/First online). de Wilde, B., Rietberg, M. T., Lajoinie, G. & Wolterink, J. M.https://doi.org/10.1007/978-3-032-04947-6_60Entropic Optimal Transport with Data-Driven Metrics on the Roto-Translation Group (2025)In Scale Space and Variational Methods in Computer Vision: 10th International Conference, SSVM 2025, Dartington, UK, May 18–22, 2025, Proceedings, Part II (pp. 350-363) (Lecture Notes in Computer Science; Vol. 15668). Springer. Pai, G., Bellaard, G., Sengers, R., Florack, L. & Duits, R.https://doi.org/10.1007/978-3-031-92369-2_27Joint Manifold Learning and Optimal Transport for Dynamic Imaging (2025)In Scale Space and Variational Methods in Computer Vision - 10th International Conference, SSVM 2025, Proceedings (pp. 400-411) (Lecture Notes in Computer Science; Vol. 15667 LNCS). Springer. Dummer, S., Vaish, P. & Brune, C.https://doi.org/10.1007/978-3-031-92366-1_31Perturbation-Aware Distributionally Robust Optimization for Inverse Problems (2025)In Scale Space and Variational Methods in Computer Vision: 10th International Conference, SSVM 2025, Dartington, UK, May 18–22, 2025, Proceedings, Part II (pp. 109-122) (Lecture Notes in Computer Science; Vol. 15668 LNCS). Springer (E-pub ahead of print/First online). van Maarschalkerwaart, F., Mukherjee, S., Sabaté Landman, M., Brune, C. & Carioni, M.https://doi.org/10.1007/978-3-031-92369-2_9Invisible Servoing: A Visual Servoing Approach with Return-Conditioned Latent Diffusion (2025)In 2025 International Conference on Unmanned Aircraft Systems, ICUAS 2025 (pp. 52-59) (International Conference on Unmanned Aircraft Systems (ICUAS); Vol. 2025). IEEE. Gerges, B., Bazzana, B., Botteghi, N., Aboudorra, Y. & Franchi, A.https://doi.org/10.1109/ICUAS65942.2025.11007885Making Statistical Inference Click for Engineering Students (2025)In Proceedings for The 22nd SEFI Special Interest Group in Mathematics – SIG in Mathematics (pp. 83-88). Kula, F.https://blogs.sonia.de/sefi25/making-statistical-inference-click-for-engineering-students/Optimal Co-Design of Sensor Placement and State Observer for Lithography Applications (2025)In 2025 IEEE Conference on Control Technology and Applications, CCTA 2025 (pp. 321-326) (2025 IEEE Conference on Control Technology and Applications, CCTA 2025). IEEE. Goetz, R. P. P. F., Van De Wouw, N., Oomen, T., Van De Wal, M. M. J., Sharif, B. & Zwart, H. J.https://doi.org/10.1109/CCTA53793.2025.11151477Piece-Wise Symplectic Model Reduction on Quadratically Embedded Manifolds (2025)In Numerical Mathematics and Advanced Applications ENUMATH 2023 (pp. 355-364) (Lecture Notes in Computational Science and Engineering; Vol. 153). Springer. Glas, S. & Mu, H.https://doi.org/10.1007/978-3-031-86173-4_36Preface (2025)In 9th International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2024, held in conjunction with the 27th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2024 (pp. v) (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). Fernandez, V., Wolterink, J. M., Wiesner, D., Remedios, S., Zuo, L. & Casamitjana, A.
Review article
Towards Scientific Machine Learning for Granular Material Simulations: Challenges and Opportunities (2025)Archives of computational methods in engineering (E-pub ahead of print/First online). Fransen, M., Fürst, A., Tunuguntla, D., Wilke, D. N., Alkin, B., Barreto, D., Brandstetter, J., Cabrera, M. A., Fan, X., Guo, M., Kieskamp, B., Kumar, K., Morrissey, J., Nuttall, J., Ooi, J., Orozco, L., Papanicolopulos, S.-A., Qu, T., Schott, D., … Cheng, H.https://doi.org/10.1007/s11831-025-10322-8Unsupervised Representation Learning in Deep Reinforcement Learning: A Review (2025)IEEE Control Systems, 45(2), 26-68. Botteghi, N., Poel, M. & Brune, C.https://doi.org/10.1109/MCS.2025.3534477
2024
Article
Deep-learning-based extraction of circle of Willis topology with anatomical priors (2024)Scientific reports, 14(1), 1-10. Article 31630. Alblas, D., Vos, I. N., Lipplaa, M. M., Brune, C., van der Schaaf, I. C., Velthuis, M. R. E., Velthuis, B. K., Kuijf, H. J., Ruigrok, Y. M. & Wolterink, J. M.https://doi.org/10.1038/s41598-024-80574-0Automatic virtual reconstruction of acetabular fractures using a statistical shape model (2024)European Journal of Trauma and Emergency Surgery, 50(6), 2925-2936. van Veldhuizen, W. A., van Noortwijk, R., Meesters, A. M. L., ten Duis, K., Schuurmann, R. C. L., de Vries, J. P. P. M., Wolterink, J. M. & IJpma, F. F. A.https://doi.org/10.1007/s00068-024-02615-7CAFLOW: Conditional autoregressive flows (2024)Foundations of Data Science, 6(4), 553-583. Batzolis, G., Carioni, M., Etmann, C., Afyouni, S., Kourtzi, Z. & Schönlieb, C. B.https://doi.org/10.3934/fods.2024028Deep learning-based segmentation of 3D ultrasound images of the thyroid (2024)WFUMB Ultrasound Open, 2(2). Article 100055. Munsterman, R., Boers, T., Braak, S. J., Wolterink, J. M., Versluis, M. & Manohar, S.https://doi.org/10.1016/j.wfumbo.2024.100055Dissecting SOX9 dynamics reveals its differential regulation in osteoarthritis (2024)Journal of cellular physiology, 239(12). Article e31443. Govindaraj, K., Kannan, S., Coutinho de Almeida, R., Jansen Klomp, L., Karperien, M., Meulenbelt, I. & Post, J. N.https://doi.org/10.1002/jcp.31443Dyadic Partition-Based Training Schemes for TV/TGV Denoising (2024)Journal of Mathematical Imaging and Vision, 66(6), 1070-1108. Davoli, E., Ferreira, R., Fonseca, I. & Iglesias, J. A.https://doi.org/10.1007/s10851-024-01213-xExact sparse representation recovery in signal demixing and group BLASSO (2024)Proceedings in Applied Mathematics and Mechanics. Carioni, M. & Grande, L. D.https://doi.org/10.1002/pamm.202400156Neural fields for 3D tracking of anatomy and surgical instruments in monocular laparoscopic video clips (2024)Healthcare Technology Letters, 11(6), 411-417. Gerats, B. G. A., Wolterink, J. M., Mol, S. P. & Broeders, I. A. M. J.https://doi.org/10.1049/htl2.12113RDA-INR: Riemannian Diffeomorphic Autoencoding via Implicit Neural Representations (2024)SIAM journal on imaging sciences, 17(4), 2302 - 2330. Dummer, S., Brune, C. & Strisciuglio, N.https://doi.org/10.1137/24M1644730Scalable exact output synchronization of discrete-time multi-agent systems in the presence of disturbances and measurement noise with known frequencies (2024)International journal of robust and nonlinear control, 34(18), 12071 - 12093. Liu, Z., Zhang, M., Saberi, A. & Stoorvogel, A. A.https://doi.org/10.1002/rnc.7605A posteriori error estimate for contact problems in porous media (2024)Computers & mathematics with applications, 174, 219-229. 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2023
Article
Hybridized Discontinuous Galerkin/Hybrid Mixed Methods for a Multiple Network Poroelasticity Model with Application in Biomechanics (2023)SIAM journal on scientific computing, 45(6), B802-B827. Kraus, J., Lederer, P. L., Lymbery, M., Osthues, K. & Schoberl, J.https://doi.org/10.1137/22M149764XData-driven analysis of parametrized acoustic systems in the frequency domain (2023)Applied mathematical modelling, 124, 791-805. Xie, X., Wang, W., Wu, H. & Guo, M.https://doi.org/10.1016/j.apm.2023.08.018Deep Learning–Based Intraoperative Stent Graft Segmentation on Completion Digital Subtraction Angiography During Endovascular Aneurysm Repair (2023)Journal of Endovascular Therapy, 30(6), 822-827. Kappe, K. O., Smorenburg, S. P. M., Hoksbergen, A. W. J., Wolterink, J. M. & Yeung, K. K.https://doi.org/10.1177/15266028221105840Symplectic model reduction of Hamiltonian systems using data-driven quadratic manifolds (2023)Computer methods in applied mechanics and engineering, 417(Part A). Article 116402. Sharma, H., Mu, H., Buchfink, P., Geelen, R., Glas, S. & Kramer, B.https://doi.org/10.1016/j.cma.2023.116402High-order projection-based upwind method for implicit large eddy simulation (2023)Journal of computational physics, 493. Article 112492. Lederer, P. L., Mooslechner, X. & Schöberl, J.https://doi.org/10.1016/j.jcp.2023.112492Discovering efficient periodic behaviors in mechanical systems via neural approximators (2023)Optimal Control Applications and Methods, 44(6), 3052-3079. Wotte, Y. P., Dummer, S., Botteghi, N., Brune, C., Stramigioli, S. & Califano, F.https://doi.org/10.1002/oca.3025Domination of semigroups on standard forms of von Neumann algebras (2023)Archiv der Mathematik, 121, 715-729. Arora, S., Chill, R. & Srivastava, S.https://doi.org/10.1007/s00013-023-01946-yUncertainty quantification for nonlinear solid mechanics using reduced order models with Gaussian process regression (2023)Computers & mathematics with applications, 149, 1-23. Cicci, L., Fresca, S., Guo, M., Manzoni, A. & Zunino, P.https://doi.org/10.1016/j.camwa.2023.08.016Periodic Center Manifolds for Nonhyperbolic Limit Cycles in ODEs (2023)International journal of bifurcation and chaos in applied sciences and engineering, 33(15). Article 2350184. Lentjes, B., Windmolders, M. & Kuznetsov, Y. A.https://doi.org/10.1142/S0218127423501845Boundedness and Unboundedness in Total Variation Regularization (2023)Applied mathematics and optimization, 88(2). Article 51. Bredies, K., Iglesias, J. A. & Mercier, G.https://doi.org/10.1007/s00245-023-10028-ySuperconvergence of DPG approximations in linear elasticity (2023)ESAIM: Mathematical Modelling and Numerical Analysis, 57(5), 2681-2699. Bertrand, F. & Schneider, H.https://doi.org/10.1051/m2an/2022071Unsupervised machine learning to classify the confinement of waves in periodic superstructures (2023)Optics express, 31(19), 31177-31199. Kozon, M., Lagendijk, A., Schlottbom, M., van der Vegt, J. J. W. & Vos, W. L.https://doi.org/10.1364/OE.492014Model order reduction for seismic waveform modelling: inspiration from normal modes (2023)Geophysical journal international, 234(3), 2255-2283. Hawkins, R., Khalid, M. H., Smetana, K. & Trampert, J.https://doi.org/10.1093/gji/ggad195A metriplectic formulation of polarized radiative transfer (2023)Journal of physics A: mathematical and theoretical, 56(34). Article 345206. Bosboom, V., Kraus, M. & Schlottbom, M.https://doi.org/10.1088/1751-8121/aceae2An in silico and in vitro human neuronal network model reveals cellular mechanisms beyond NaV1.1 underlying Dravet syndrome (2023)Stem cell reports, 18(8), 1686-1700. Doorn, N., Hugte, E. J. H. v., Ciptasari, U., Mordelt, A., Meijer, H. G. E., Schubert, D., Frega, M., Nadif Kasri, N. & Putten, M. J. A. M. v.https://doi.org/10.1016/j.stemcr.2023.06.003The U-Net Family for Epicardial Adipose Tissue Segmentation and Quantification in Low-Dose CT (2023)Technologies, 11(4). Article 104. Liu, L., Ma, R., van Ooijen, P. M. A., Oudkerk, M., Vliegenthart, R., Veldhuis, R. N. J. & Brune, C.https://doi.org/10.3390/technologies110401043D human pose estimation in multi-view operating room videos using differentiable camera projections (2023)Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, 11(4), 1197-1205. Gerats, B. G. A., Wolterink, J. M. & Broeders, I. A. M. J.https://doi.org/10.1080/21681163.2022.2155580Analysis of a mixed discontinuous Galerkin method for the time-harmonic Maxwell equations with minimal smoothness requirements (2023)IMA Journal of Numerical Analysis, 23(4), 2320–2351. Liu, K., Gallistl, D., Schlottbom, M. & van der Vegt, J. J. W.https://doi.org/10.1093/imanum/drac044Asymptotically exact a posteriori error estimates for the BDM finite element approximation of mixed Laplace eigenvalue problems (2023)BIT, 63(2). Article 34. Lederer, P. L.https://doi.org/10.1007/s10543-023-00976-wCharacterization of Orlicz admissibility (2023)Semigroup forum, 106(3), 633-661. Hosfeld, R., Jacob, B. & Schwenninger, F.https://doi.org/10.1007/s00233-023-10352-3Development of a Statistical Shape Model and Assessment of Anatomical Shape Variations in the Hemipelvis (2023)Journal of Clinical Medicine, 12(11). Article 3767. van Veldhuizen, W. A., van der Wel, H., Kuipers, H. Y., Kraeima, J., ten Duis, K., Wolterink, J. M., de Vries, J. P. P. M., Schuurmann, R. C. L. & IJpma, F. F. A.https://doi.org/10.3390/jcm12113767Divergence-Conforming Velocity and Vorticity Approximations for Incompressible Fluids Obtained with Minimal Facet Coupling (2023)Journal of scientific computing, 95(3). Article 91. Gopalakrishnan, J., Kogler, L., Lederer, P. L. & Schöberl, J.https://doi.org/10.1007/s10915-023-02203-8Non-linear space-time elasticity (2023)International journal for numerical methods in engineering, 124(9), 1965-1990. Schuss, S., Glas, S. & Heschhttps://doi.org/10.1002/nme.7194Symplectic Model Reduction of Hamiltonian Systems on Nonlinear Manifolds and Approximation with Weakly Symplectic Autoencoder (2023)SIAM journal on scientific computing, 45(2), A289-A311. Buchfink, P., Glas, S. & Haasdonk, B.https://doi.org/10.1137/21M1466657Unsupervised convolutional autoencoders for 4D transperineal ultrasound classification (2023)Journal of medical imaging, 10(1). Article 014004. Van Den Noort, F., Manzini, C., Hofsteenge, M., Sirmacek, B., Van Der Vaart, C. H. & Slump, C. H.https://doi.org/10.1117/1.JMI.10.1.014004A reduced order model for the finite element approximation of eigenvalue problems (2023)Computer methods in applied mechanics and engineering, 404. Article 115696. Bertrand, F., Boffi, D. & Halim, A.https://doi.org/10.1016/j.cma.2022.115696Multi-fidelity surrogate modeling using long short-term memory networks (2023)Computer methods in applied mechanics and engineering, 404. Article 115811. Conti, P., Guo, M., Manzoni, A. & Hesthaven, J. S.https://doi.org/10.1016/j.cma.2022.115811Discontinuous Petrov-Galerkin Approximation of Eigenvalue Problems (2023)Computational Methods in Applied Mathematics, 23(1), 1-17. Bertrand, F., Boffi, D. & Schneider, H.https://doi.org/10.1515/cmam-2022-0069Estimating Space-Dependent Coefficients for 1D Transport using Gaussian Processes as State Estimator in the Frequency Domain (2023)IEEE Control Systems Letters, 7, 247-252. van Kampen, R. J. R., van Berkel, M. & Zwart, H.https://doi.org/10.1109/LCSYS.2022.3186626External Forces in the Continuum Limit of Discrete Systems with Non-Convex Interaction Potentials: Compactness for a Γ-Development (2023)Journal of Convex Analysis, 30(1), 217-247. Carioni, M., Fischer, J. & Schlömerkemper, A.https://www.heldermann.de/JCA/JCA30/JCA301/jca30013.htmMathematical and Numerical Modelling of Interference of Immune Cells in the Tumour Environment (2023)Discrete Dynamics in Nature and Society, 2023, 1-18. Article 9006678. Sinha, S., Singh, P. & Köksal, M. E.https://doi.org/10.1155/2023/9006678Windowed Green function method for wave scattering by periodic arrays of 2D obstacles (2023)Studies in Applied Mathematics, 150(1), 277-315. Article 12540. Strauszer, T., Faria, L. M., Fernandez-Lado, A. & Perez-Arancibia, C.https://doi.org/10.1111/sapm.12540
Chapter
Reproducibility in Machine Learning for Medical Imaging (2023)In Machine learning for brain disorders (pp. 631-653) (Neuromethods; Vol. 197). Humana Press. Colliot, O., Thibeau-Sutre, E. & Burgos, N.https://doi.org/10.1007/978-1-0716-3195-9_21SE(3) Symmetry Lets Graph Neural Networks Learn Arterial Velocity Estimation from Small Datasets (2023)In Functional Imaging and Modeling of the Heart: 12th International Conference, FIMH 2023, Lyon, France, June 19–22, 2023, Proceedings (pp. 445-454). Suk, J., Brune, C. & Wolterink, J. M.https://doi.org/10.1007/978-3-031-35302-4_46
Conference contribution
Scale-free linear protocol design for global regulated state synchronization of discrete-time double-integrator multi-agent systems subject to actuator saturation (2023)In 2023 35th Chinese Control and Decision Conference (CCDC) (pp. 4180-4186). IEEE. Liu, Z., Saberi, A. A. & Stoorvogel, A. A.https://doi.org/10.1109/CCDC58219.2023.10326820DFM-X: Augmentation by Leveraging Prior Knowledge of Shortcut Learning (2023)In 2023 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW) (pp. 129-138). Article 10350684 (Proceedings IEEE/CVF International Conference on Computer Vision Workshops (ICCVW); Vol. 2023). IEEE. Wang, S., Brune, C., Veldhuis, R. & Strisciuglio, N.https://doi.org/10.1109/ICCVW60793.2023.00020What do neural networks learn in image classification? A frequency shortcut perspective (2023)In 2023 IEEE/CVF International Conference on Computer Vision (ICCV) (pp. 1433-1442). 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Editorial
Editorial - Recent Fails and Findings of Numerical Methods in Mechanics (2023)Examples and Counterexamples, 3. Article 100098. Bertrand, F. & Mang, K.https://doi.org/10.1016/j.exco.2022.100098Table Mountain Delta: Reflect. Connect. Be inspired! (2023)International Journal of Mathematical Education in Science and Technology, 54(9), 1761-1764. Craig, T. S., Blackman, C. & Oates, G.https://doi.org/10.1080/0020739X.2023.2270241
Paper
Enhancing Engineering Students' Mathematics Learning Through Digitised Effective Feedback (2023)[Contribution to conference › Paper] 51st Annual Conference of the European Society for Engineering Education, SEFI 2023. Akkaya, T. & Kula, F.https://doi.org/10.21427/QQ8B-Y539Exploring Strategies To Promote Engagement And Active Learning Through Digital Course Design In Engineering Mathematics (2023)[Contribution to conference › Paper] 51st Annual Conference of the European Society for Engineering Education, SEFI 2023. Kula, F., Horstman, E. M., Lanting, L. S. & ten Klooster, L. R.https://doi.org/10.21427/5QFW-PY91
2022
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Deep kernel learning of dynamical models from high-dimensional noisy data (2022)Scientific reports, 12, 21530. Article 21530. Botteghi, N., Guo, M. & Brune, C.https://doi.org/10.1038/s41598-022-25362-4Bayesian operator inference for data-driven reduced-order modeling (2022)Computer methods in applied mechanics and engineering, 402. Article 115336. Guo, M., McQuarrie, S. A. & Willcox, K. E.https://doi.org/10.1016/j.cma.2022.115336Convergence of level sets in fractional Laplacian regularization (2022)Inverse problems, 38(12). Article 124003. Iglesias, J. A. & Mercier, G.https://doi.org/10.1088/1361-6420/ac9805Windowed Green Function MoM for Second-Kind Surface Integral Equation Formulations of Layered Media Electromagnetic Scattering Problems (2022)IEEE transactions on antennas and propagation, 70(12), 11978-11989. 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L., Ijpma, F. F. A., Kropman, R. H. J., Antoniou, G. A., Wolterink, J. M. & de Vries, J. P. P. M.https://doi.org/10.3390/jcm11061687Forced to improve: open book and open internet assessment in vector calculus (2022)International Journal of Mathematical Education in Science and Technology, 53(3), 639-646. Craig, T. S. & Akkaya, T.https://doi.org/10.1080/0020739X.2021.1977403No exam: assessment of third-year engineering students on the basis of self-generated Statistics cases (2022)International Journal of Mathematical Education in Science and Technology, 53(3), 647-655. Litvak, N. & Kula, F.https://doi.org/10.1080/0020739X.2021.1982041The unexpected consequences of replacing corridor chats with an online community of practice (2022)International Journal of Mathematical Education in Science and Technology, 53(3), 745-751. Campbell, A. L., Craig, T. S., Mofolo-Mbokane, B. & Padayachee, P.https://doi.org/10.1080/0020739X.2021.1985179Design principles for final answer assessment in linear algebra: Implications for digital testing (2022)Teaching Mathematics and its Applications, 41(4), 280–291. Veale, A. J. & Craig, T. S.https://doi.org/10.1093/teamat/hrac002AI-Based Quantification of Planned Radiation Therapy Dose to Cardiac Structures and Coronary Arteries in Patients With Breast Cancer (2022)International journal of radiation: Oncology - Biology - Physics, 112(3), 611-620. van Velzen, S. G. M., Bruns, S., Wolterink, J. M., Leiner, T., Viergever, M. A., Verkooijen, H. M. & Išgum, I.https://doi.org/10.1016/j.ijrobp.2021.09.009Deep learning-based whole-heart segmentation in 4D contrast-enhanced cardiac CT (2022)Computers in biology and medicine, 142. Article 105191. Bruns, S., Wolterink, J. M., Boogert, T. P. W. v. d., Runge, J. H., Bouma, B. J., Henriques, J. P., Baan, J., Viergever, M. A., Planken, R. 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Implicit Neural Representations for Generative Modeling of Living Cell Shapes (2022)In Medical Image Computing and Computer Assisted Intervention – MICCAI 2022: 25th International Conference, Singapore, September 18–22, 2022, Proceedings, Part IV (pp. 58-67) (Lecture Notes in Computer Science; Vol. 13434). Springer. Wiesner, D., Suk, J., Dummer, S., Svoboda, D. & Wolterink, J. M.https://doi.org/10.1007/978-3-031-16440-8_6
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Implicit Neural Representations for Deformable Image Registration (2022)Proceedings of Machine Learning Research, 172, 1349-1359. Wolterink, J. M., Zwienenberg, J. C. & Brune, C.Optimal Bases for Symplectic Model Order Reduction of Canonizable Linear Hamiltonian Systems (2022)IFAC-papersonline, 55(20), 463-468. Buchfink, P., Glas, S. & Haasdonk, B.https://doi.org/10.1016/j.ifacol.2022.09.138
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Robust discretizations for poroelastic problems: engineering and mathematical points of views in a presenation in pairs (2022)In ECCOMAS Congress 2022 - 8th European Congress on Computational Methods in Applied Sciences and Engineering. Bertrand, F. & Brodbeck, M.https://doi.org/10.23967/eccomas.2022.236Constructive gravity: Foundations and Applications (2022)In The Fifteenth Marcel Grossmann Meeting: On Recent Developments in Theoretical and Experimental General Relativity, Astrophysics and Relativistic Field Theories (In 3 Volumes) (pp. 677–697) (The Marcel Grossmann Meetings; Vol. 2018). World Scientific. Schuller, F. P.https://doi.org/10.1142/9789811258251_0091A High-order Density-Interpolation-Based Nyström Method for Three-Dimensional Electromagnetic Boundary Integral Equations (2022)In The 15th International Conference on Mathematical and Numerical Aspects of Wave Propagation (pp. 158-159). Arrieta, R., Faria, L. M., Perez-Arancibia, C. & Turc, C.https://filesender.renater.fr/download.php?token=400b0beb-ad4b-49de-9268-b5097fe1d5c0&files_ids=16517819Self-supervised Learning Through Colorization for Microscopy Images (2022)In Image Analysis and Processing – ICIAP 2022: 21st International Conference, Lecce, Italy, May 23-27, 2022. Proceedings, Part II (pp. 621-632) (Lecture Notes in Computer Science; Vol. 13232). Springer. Pandey, V., Brune, C. & Strisciuglio, N.https://doi.org/10.1007/978-3-031-06430-2_52Now what? Pedagogical implications of a shift to open book assessment of vector calculus (2022)In Proceedings of the 2022 IEEE Global Engineering Education Conference, EDUCON 2022 (pp. 1903-1909) (IEEE Global Engineering Education Conference, EDUCON; Vol. 2022). IEEE. Craig, T. S., Kula, F. & Akkaya, T.https://doi.org/10.1109/EDUCON52537.2022.9766568Deep Learning-Based Carotid Artery Vessel Wall Segmentation in Black-Blood MRI Using Anatomical Priors (2022)In Medical Imaging 2022: Image Processing. Article 120320Y (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; Vol. 12032). SPIE. Alblas, D., Brune, C. & Wolterink, J. M.https://doi.org/10.1117/12.2611112Windowed Green function method for acoustic and electromagnetic wave scattering by periodic media (2022)In Conference on Mathematics of Wave Phenomena (pp. 54-54). Strauszer, T., Faria, L. M. & Perez-Arancibia, C.https://conference22.waves.kit.edu/BoA.pdfModal interaction in a levitation force MEMS based resonator (2022)In Proceedings of ASME 2021 International Mechanical Engineering Congress and Exposition (IMECE2021). Article V07BT07A064 (ASME International Mechanical Engineering Congress and Exposition, Proceedings (IMECE); Vol. 7B-2021). American Society of Mechanical Engineers. Zamanzadeh, M., Meijer, H. G. E., Jafarsadeghi-Pournaki, I. & Ouakad, H. M.https://doi.org/10.1115/IMECE2021-72755Observability for port-Hamiltonian systems (2022)In 2021 European Control Conference, ECC 2021 (pp. 2052-2057). IEEE. Jacob, B. & Zwart, H.https://doi.org/10.23919/ECC54610.2021.9654840Frequency Shortcut Learning in Neural Networks (2022)In NeurIPS 2022 Workshop on Distribution Shifts: Connecting Methods and Applications. Wang, S., Veldhuis, R., Brune, C. & Strisciuglio, N.https://openreview.net/forum?id=zAfUHtSGWwGoing Off-Grid: Continuous Implicit Neural Representations for 3D Vascular Modeling (2022)In Statistical Atlases and Computational Models of the Heart. Regular and CMRxMotion Challenge Papers: 13th International Workshop, STACOM 2022, Held in Conjunction with MICCAI 2022, Singapore, September 18, 2022, Revised Selected Papers (pp. 79-90). Alblas, D., Brune, C., Yeung, K. K. & Wolterink, J. M.https://doi.org/10.1007/978-3-031-23443-9_8Mesh convolutional neural networks for wall shear stress estimation in 3D artery models (2022)In Statistical Atlases and Computational Models of the Heart. Multi-Disease, Multi-View, and Multi-Center Right Ventricular Segmentation in Cardiac MRI Challenge: 12th International Workshop, STACOM 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, September 27, 2021, Revised Selected Papers (pp. 93-102). Suk, J. M., de Haan, P., Lippe, P., Brune, C. & Wolterink, J. M.https://doi.org/10.1007/978-3-030-93722-5_11Scalable global state synchronization of discrete-time double integrator multi-agent systems with input saturation via linear protocol (2022)In Proceedings of the 41st Chinese Control Conference, CCC 2022 (pp. 5020-5025) (Chinese Control Conference (CCC); Vol. 2022). IEEE. Liu, Z., Saberi, A. & Stoorvogel, A. A.https://doi.org/10.23919/CCC55666.2022.9901674Scaling theory of wave confinement in classical and quantum periodic systems (2022)In Integrated Photonics Research, Silicon and Nanophotonics, IPR 2022. Article JM2D.2 (Optics InfoBase Conference Papers). Optica Publishing Group (formerly OSA). Kozon, M., Lagendijk, A., Schlottbom, M., van der Vegt, J. J. W. & Vos, W. L.Size-Robust Multiscale FEM for Light Propagation Through Realistic Photonic Crystals (2022)In Bragg Gratings, Photosensitivity and Poling in Glass Waveguides and Materials, BGPP 2022. Article JTu2A.15 (Optics InfoBase Conference Papers). Optica Publishing Group (formerly OSA). Kozon, M., Van Willenswaard, L. J. C., Schlottbom, M., Vos, W. L. & Van Der Vegt, J. J. W.The Increasing Necessity of Skills Diversity in Team Teaching (2022)In SEFI 2022 50th Annual Conference of The European Society for Engineering Education: Towards a new future in engineering education, new scenarios that European alliances of tech universities open up (pp. 1898-1902). Artes Gráficas Torres S.L.. Craig, T. S. & Redeker, S.https://www.sefi.be/wp-content/uploads/2022/12/ebook-sefi-2022-1.pdfThe starry night of reaction diffusion, winner of the arts & science contest (2022)In ECCOMAS Congress 2022 - 8th European Congress on Computational Methods in Applied Sciences and Engineering. Bertrand, F.https://doi.org/10.23967/eccomas.2022.165Towards Autonomous Pipeline Inspection with Hierarchical Reinforcement Learning (2022)In Robot Intelligence Technology and Applications 6 - Results from the 9th International Conference on Robot Intelligence Technology and Applications (pp. 259-271) (Lecture Notes in Networks and Systems; Vol. 429 LNNS). Springer. 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Editorial
Preface to Focused Issue on Discontinuous Galerkin Methods (2022)Communications on Applied Mathematics and Computation, 4(1), 1-2. Hesthaven, J. S., Ryan, J., Shu, C. W., van der Vegt, J., Xu, Y., Zhang, Q. & Zhang, Z.https://doi.org/10.1007/s42967-021-00170-1
2021
Article
Enhanced absorption in thin and ultrathin silicon films by 3D photonic band gap back reflectors (2021)Optics express, 29(25), 41023-41047. Sharma, D., Hasan, S. B., Saive, R., van der Vegt, J. J. W. & Vos, W. L.https://doi.org/10.1364/OE.435412A sampled-data approach to optimal relaxed-causal sampling (2021)Mathematics of control, signals and systems, 33(4), 669-705. Shekhawat, H. S. & Meinsma, G.https://doi.org/10.1007/s00498-021-00297-9H ∞ and H 2 almost output and regulated output synchronization of heterogeneous multi-agent systems: A scale-free protocol design (2021)Journal of the Franklin Institute, 358(18), 9841 - 9866. Nojavanzadeh, D., Liu, Z., Saberi, A. A. & Stoorvogel, A. A.https://doi.org/10.1016/j.jfranklin.2021.10.002Phase field method for quasi‐static brittle fracture: an adaptive algorithm based on the dual variable (2021)Proceedings in Applied Mathematics and Mechanics, 21(1). Article e202100213. 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E., Gensch, T. & Fahlke, C.https://doi.org/10.3389/fncel.2021.735300Scale-free protocol design for delayed regulated synchronization of multi-agent systems subject to unknown, nonuniform, and arbitrarily large communication delays (2021)International journal of robust and nonlinear control, 31(13), 6369-6391. Nojavanzadeh, D., Liu, Z., Saberi, A. & Stoorvogel, A. A.https://doi.org/10.1002/rnc.5621Funnel control for boundary control systems (2021)Evolution equations and control theory, 10(3), 519-544. Puche, M., Reis, T. & Schwenninger, F. L.https://doi.org/10.3934/eect.2020079Identification of movements and postures using wearable sensors for implementation in a bi-hormonal artificial pancreas system (2021)Sensors (Switzerland), 21(17). Article 5954. Sawaryn, B., Klaassen, M., van Beijnum, B.-J., Zwart, H. & Veltink, P. H.https://doi.org/10.3390/s21175954The Closed Loop Between Opinion Formation and Personalized Recommendations (2021)IEEE transactions on control of network systems, 9(3), 1092-1103. Rossi, W. S., Polderman, J. W. & Frasca, P.https://doi.org/10.1109/TCNS.2021.3105616A model reduction approach for inverse problems with operator valued data (2021)Numerische Mathematik, 148, 889-917. Schlottbom, M., Egger, H. & Dölz, J.https://doi.org/10.1007/s00211-021-01224-5On the role of arkypallidal and prototypical neurons for phase transitions in the external pallidum (2021)The Journal of neuroscience, 41(31), 6673-6683. Gast, R., Gong, R., Schmidt, H., Meijer, H. G. E. & Knosche, T.https://doi.org/10.1523/JNEUROSCI.0094-21.2021The method of images in thermoelasticity with an application to wafer heating (2021)Journal of Thermal Stresses, 44(8), 970-1010. Veldman, D. W. M., Fey, R. H. B., Zwart, H., van de Wal, M. M. J., van den Boom, J. D. B. J. & Nijmeijer, H.https://doi.org/10.1080/01495739.2021.1936321Directionality of corticomuscular coupling in essential tremor and cortical myoclonic tremor (2021)Clinical neurophysiology, 132(8), 1878-1886. Sharifi, S., Luft, F., Potgieter, S., Heida, T., Mugge, W., Schouten, A. C., Bour, L. J. & Rootselaar, A. F. v.https://doi.org/10.1016/j.clinph.2021.04.011Least-squares formulations for eigenvalue problems associated with linear elasticity (2021)Computers & mathematics with applications, 95, 19-27. Bertrand, F. & Boffi, D.https://doi.org/10.1016/j.camwa.2020.12.013An Adaptive Finite Element Scheme for the Hellinger-Reissner Elasticity Mixed Eigenvalue Problem (2021)Computational Methods in Applied Mathematics, 21(3), 501-512. Bertrand, F., Boffi, D. & Ma, R.https://doi.org/10.1515/cmam-2020-0034Bistability and Stabilization of Human Visual Perception under Ambiguous Stimulation (2021)Nonlinear Dynamics, Psychology, and Life Sciences, 25(3), 297-307. Govaerts, W., Kuznetsov, Y. A., Meijer, H. G. E., Neirynck, N. & van Wezel, R. J. A.Weakly symmetric stress equilibration and a posteriori error estimation for linear elasticity (2021)Numerical Methods for Partial Differential Equations, 37(4), 2783-2802. Bertrand, F., Kober, B., Moldenhauer, M. & Starke, G.https://doi.org/10.1002/num.22741Ion dynamics at the energy-deprived tripartite synapse (2021)PLoS Computational Biology, 17(6). Article e1009019. Kalia, M., Meijer, H. G. E., van Gils, S. A., van Putten, M. J. A. M. & Rose, C. R.https://doi.org/10.1371/journal.pcbi.1009019Stabilization of port-Hamiltonian systems by nonlinear boundary control in the presence of disturbances (2021)ESAIM: Control, Optimization and Calculus of Variations, 27. Article 53. Schmid, J. & Zwart, H.https://doi.org/10.1051/cocv/2021051A posteriori error estimates by weakly symmetric stress reconstruction for the Biot problem (2021)Computers & mathematics with applications, 91, 3-16. Bertrand, F. & Starke, G.https://doi.org/10.1016/j.camwa.2020.10.011Convergence analysis of the scaled boundary finite element method for the Laplace equation (2021)Advances in computational mathematics, 47(3). Article 34. Bertrand, F., Boffi, D. & G. de Diego, G.https://doi.org/10.1007/s10444-021-09852-zPort-Hamiltonian Modeling of Ideal Fluid Flow: Part I. Foundations and Kinetic Energy (2021)Journal of geometry and physics, 164. Article 104201. Rashad, R., Califano, F., Schuller, F. P. & Stramigioli, S.https://doi.org/10.1016/j.geomphys.2021.104201Port-Hamiltonian Modeling of Ideal Fluid Flow: Part II. Compressible and Incompressible Flow (2021)Journal of geometry and physics, 164. Article 104199. Rashad, R., Califano, F., Schuller, F. P. & Stramigioli, S.https://doi.org/10.1016/j.geomphys.2021.104199Scale-free collaborative protocol design for state and regulated state synchronization of multi-agent systems with arbitrary fast convergence (2021)Journal of the Franklin Institute, 358(9), 4864-4882. Liu, Z., Saberi, A. A., Stoorvogel, A. A. & Nojavanzadeh, D.https://doi.org/10.1016/j.jfranklin.2021.04.001Scale-free protocol design for regulated state synchronization of homogeneous multi-agent systems with unknown and non-uniform input delays (2021)Systems and control letters, 152. Article 104927. Liu, Z., Nojavanzadeh, D., Saberi, D., Saberi, A. A. & Stoorvogel, A. A.https://doi.org/10.1016/j.sysconle.2021.104927Mechanisms Underlying Vascular Endothelial Growth Factor Receptor Inhibition-Induced Hypertension: The HYPAZ Trial (2021)Hypertension, 77(5), 1591-1599. Mäki-Petäjä, K. M., McGeoch, A., Yang, L. L., Hubsch, A., McEniery, C. M., Meyer, P. A. 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A. & van de Wouw, N.https://doi.org/10.1016/j.sysconle.2021.104881Semi-Global State Synchronization for Multi-Agent Systems Subject to Actuator Saturation and Unknown Nonuniform Input Delay (2021)IEEE Transactions on Network Science and Engineering, 8(1), 488-497. Article 9288764. Zhang, M., Saberi, A. A. & Stoorvogel, A. A.https://doi.org/10.1109/TNSE.2020.3042752Bulk nanomachining of cantilevers with Nb nanoSQUIDs based on nanobridge Josephson junctions (2021)Superconductor science and technology, 34(3). Article 035014. Faley, M. I., Bikulov, T. I., Bosboom, V., Golubov, A. A. & Dunin-Borkowski, R. E.https://doi.org/10.1088/1361-6668/abda5c(INVITED) Homoclinic puzzles and chaos in a nonlinear laser model (2021)Communications in Nonlinear Science and Numerical Simulation, 93. Article 105503. Pusuluri, K., Meijer, H. G. E. & Shilnikov, A. L.https://doi.org/10.1016/j.cnsns.2020.105503Riesz Bases Of Port-Hamiltonian Systems (2021)SIAM journal on control and optimization, 59(6), 4646-4665. Jacob, B., Kaiser, J. T. & Zwart, H.https://doi.org/10.1137/20M1366216
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Predictive Monitoring of Large-Scale Engineering Assets Using Machine Learning Techniques and Reduced-Order Modeling (2021)In Structural health monitoring based on data science techniques (pp. 185-205) (Structural Integrity (STIN); Vol. 21). Springer. Bigoni, C., Guo, M. & Hesthaven, J. S.https://doi.org/10.1007/978-3-030-81716-9_9
Conference article
Rlsnake: A hybrid reinforcement learning approach for road detection (2021)International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, 43(B3-2021), 39-45. Botteghi, N., Sirmacek, B. & Ünsalan, C.https://doi.org/10.5194/isprs-archives-XLIII-B3-2021-39-2021CURIOSITY-DRIVEN REINFORCEMENT LEARNING AGENT for MAPPING UNKNOWN INDOOR ENVIRONMENTS (2021)ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences, 5(1), 129-136. Botteghi, N., Sirmacek, B., Poel, M., Brune, C. & Schulte, R.https://doi.org/10.5194/isprs-annals-V-1-2021-129-2021Port-Hamiltonian modelling of fluid dynamics models with variable cross-section (2021)IFAC-papersonline, 54(9), 365-372. Bansal, H., Zwart, H., Iapichino, L., Schilders, W. & Wouw, N. V. D.https://doi.org/10.1016/j.ifacol.2021.06.095Exterior and vector calculus views of incompressible Navier-Stokes port-Hamiltonian models (2021)IFAC-papersonline, 54(19), 173-179. Rashad, R., Califano, F., Brugnoli, A., Schuller, F. P. & Stramigioli, S.https://doi.org/10.1016/j.ifacol.2021.11.074
Conference contribution
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Conference contribution
Stabilisation of a Rotating Beam Clamped on a Moving Inertia with Strong Dissipation Feedback (2020)In 2020 59th IEEE Conference on Decision and Control, CDC 2020 (pp. 5056-5061). Article 9304038. IEEE. Mattioni, A., Wu, Y., Gorrec, Y. L. & Zwart, H.https://doi.org/10.1109/CDC42340.2020.9304038Regulated State Synchronization for Discrete-time Homogeneous Networks of Non-introspective Agents in Presence of Unknown Non-uniform Input Delays: A Scale-free Protocol Design (2020)In 39th Chinese Control Conference, CCC 2020 (pp. 4383-4388). Article 9188425 (Chinese Control Conference, CCC; Vol. 2020-July). IEEE. Liu, Z., Nojavanzadeh, D., Saberi, D., Saberi, A. & Stoorvogel, A. A.https://doi.org/10.23919/CCC50068.2020.9188425Scale-free Linear Observer-based Protocol Design for Global Regulated State Synchronization of Homogeneous Multi-agent Systems with Non-introspective Agents Subject to Input Saturation (2020)In 2020 39th Chinese Control Conference (CCC) (pp. 4801 - 4806). 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A counterexample for the inf-sup stability of the RT0 − P1 ⊂ L2(Ω) × H10(Ω) finite element combination for the mixed Poisson equation (2019)Proceedings in Applied Mathematics and Mechanics, 19(1). Article e201900426. Bertrand, F. & Boffi, D.https://doi.org/10.1002/pamm.201900426A Partially-Learned Algorithm for Joint Photo-acoustic Reconstruction and Segmentation (2019)IEEE transactions on medical imaging, 39(1), 129-139. Article 8734097. Boink, Y. E., Manohar, S. & Brune, C.https://doi.org/10.1109/TMI.2019.2922026Residual-based a posteriori error analysis for symmetric mixed Arnold–Winther FEM (2019)Numerische Mathematik, 142, 205-234. Carstensen, C., Gallistl, D. & Gedicke, J.https://doi.org/10.1007/s00211-019-01029-7The ventricular fibrillation waveform in relation to shock success in early vs. late phases of out-of-hospital resuscitation (2019)Resuscitation, 139, 99-105. Thannhauser, J., Nas, J., van Grunsven, P. M., Meinsma, G., Zwart, H. J., de Boer, M. J., van Royen, N., Bonnes, J. L. & Brouwer, M. A.https://doi.org/10.1016/j.resuscitation.2019.04.010Well-posedness of infinite-dimensional linear systems with nonlinear feedback (2019)Systems and control letters, 128, 19-25. Hastir, A., Califano, F. & Zwart, H.https://doi.org/10.1016/j.sysconle.2019.04.002A Comparison of Evoked and Non-evoked Functional Networks (2019)Brain topography, 32(3), 405-417. Hebbink, J., van Blooijs, D., Huiskamp, G., Leijten, F. S. S., van Gils, S. A. & Meijer, H. G. E.https://doi.org/10.1007/s10548-018-0692-1On continuity of solutions for parabolic control systems and input-to-state stability (2019)Journal of differential equations, 266(10), 6284-6306. Jacob, B., Schwenninger, F. L. & Zwart, H.https://doi.org/10.1016/j.jde.2018.11.004Zero dynamics for networks of waves (2019)Automatica, 103, 310-321. Jacob, B., Morris, K. A. & Zwart, H.https://doi.org/10.1016/j.automatica.2019.02.010Randomized residual-based error estimators for parametrized equations (2019)SIAM journal on scientific computing, 41(2), A900-A926. Smetana, K., Zahm, O. & Patera, A. T.https://doi.org/10.1137/18M120364XMixed Finite Element Approximation of the Hamilton--Jacobi--Bellman Equation with Cordes Coefficients (2019)SIAM journal on numerical analysis, 57(2), 592-614. Gallistl, D. & Süli, E.https://doi.org/10.1137/18M1192299(Parametrized) First Order Transport Equations: Realization of Optimally Stable Petrov-Galerkin Methods (2019)SIAM journal on scientific computing, 41(1), A592-A621. Brunken, J., Smetana, K. & Urban, K.https://doi.org/10.1137/18M1176269On boundary damping to reduce the rain–wind oscillations of an inclined cable with small bending stiffness (2019)Nonlinear Dynamics, 95(1), 783-808. Akkaya, T. & van Horssen, W. T.https://doi.org/10.1007/s11071-018-4596-0
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The Twente educational model in theory and practice: two modules as exemplars (2019)In Swan Delta 2019 Proceedings: The 12th Delta Conference on the teaching and learning of undergraduate mathematics and statistics: reflections of change proceedings (pp. 19 - 28). Western Sydney University. Craig, T. S.https://doi.org/10.26183/5d5f53ed9c926Optimal actuator shape design with input and state constraints for a wafer heating application (2019)In 2019 American Control Conference, ACC 2019 (pp. 3789-3794). Article 8814819. IEEE. Veldman, D. W. M., Fey, R. H. B., Zwart, H. J., van de Wal, M. M. J., van den Boom, J. D. B. J. & Nijmeijer, H.https://doi.org/10.23919/ACC.2019.8814819Cartesian light': How does light propagate in a 3D superlattice of photonic bandgap cavities? (2019)In 2019 Conference on Lasers and Electro-Optics Europe and European Quantum Electronics Conference, CLEO/Europe-EQEC 2019. Article 8873114. IEEE. Hack, S. A., Van Der Vegt, J. J. W. & Vos, W. L.https://doi.org/10.1109/CLEOE-EQEC.2019.8873114Compliance feedforward of flexible structures (2019)In 38th Benelux Meeting on Systems and Control, March 19-21, 2019 Lommel, Belgium: Book of Abstracts (pp. 131-131). Katholieke Universiteit Leuven. Sharifi, S. F. & Zwart, H.Placement of temperature sensors in a one-dimensional thermal system (2019)In 38th Benelux Meeting on Systems and Control, March 19-21, 2019 Lommel, Belgium: Book of Abstracts (pp. 169-169). Katholieke Universiteit Leuven. Veldman, D. W. M., Fey, R. H. B., Zwart, H. J., van de Wal, M. M. J., van den Boom, J. D. B. J. & Nijmeijer, H.Bayesian Model-based State Estimation for Mass Production Metal Forming (2019)In 38th International Deep Drawing Research Group Conference (pp. 1-8). Article 012095 (IOP Conference Series: Materials Science and Engineering; Vol. 651). IOP Science. Havinga, J., Mandal, P. K. & van den Boogaard, A. H.https://doi.org/10.1088/1757-899X/651/1/012095
2018
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Evoked directional network characteristics of epileptogenic tissue derived from single pulse electrical stimulation (2018)Human brain mapping, 39(11), 4611-4622. van Blooijs, D., Leijten, F. S. S., van Rijen, P. C., Meijer, H. G. E. & Huiskamp, G. J. M.https://doi.org/10.1002/hbm.24309Numerical bifurcation analysis of double +1 multiplier in ℤ3-symmetric maps (2018)Journal of difference equations and applications, 24(9), 1402-1413. Mazrooei-Sebdani, R., Eskandari, Z. & Meijer, H. G. E.https://doi.org/10.1080/10236198.2018.1491558Remarks on homoclinic structure in Bogdanov-Takens map (2018)Journal of difference equations and applications, 24(4), 575-587. Al-Hdaibat, B., Govaerts, W., van Kekem, D. L. & Kuznetsov, Y. A.https://doi.org/10.1080/10236198.2017.1329894Randomized local model order reduction (2018)SIAM journal on scientific computing, 40(4), A2120-A2151. Buhr, A. & Smetana, K.https://doi.org/10.1137/17M1138480
Conference article
Stress‐based Finite Element Methods for Sea Ice Dynamics (2018)Proceedings in Applied Mathematics and Mechanics, 18(1). Article e201800450. Bertrand, F.https://doi.org/10.1002/pamm.201800450
Conference contribution
Spectral AB simulations for coastal and ocean engineering applications (2018)In Proceedings of the Fourth International Conference in Ocean Engineering (ICOE2018) (pp. 207-217) (Lecture Notes in Civil Engineering; Vol. 23). Springer. Kurnia, R., Turnip, P. & van Groesen, E.https://doi.org/10.1007/978-981-13-3134-3_16Passivity based delayed state synchronization of discrete-time multi-agent systems in presence of unknown communication delays (2018)In 2018 Annual American Control Conference, ACC 2018 (pp. 5207-5212). Article 8431721 (Proceedings of the American Control Conference; Vol. 2018-June). IEEE. Liu, Z., Saberi, A. & Stoorvogel, A. A.https://doi.org/10.23919/ACC.2018.8431721
2017
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On the uniqueness of nonlinear diffusion coefficients in the presence of lower order terms (2017)Inverse problems, 33(11). Egger, H., Pietschmann, J.-F. & Schlottbom, M.https://doi.org/10.1088/1361-6420/aa8caeAnalysis of the Diffuse Domain Method for Second Order Elliptic Boundary Value Problems (2017)Foundations of Computational Mathematics, 17(3), 627-674. Burger, M., Elvetun, O. & Schlottbom, M.https://doi.org/10.1007/s10208-015-9292-6
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Continuum Modeling of Biological Network Formation (2017)In Active Particles, Volume 1: Advances in Theory, Models, and Applications (pp. 1-48) (Modeling and Simulation in Science, Engineering and Technology ). Springer. Albi, G., Burger, M., Haskovec, J., Markowich, P. & Schlottbom, M.https://doi.org/10.1007/978-3-319-49996-3
2016
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A class of Galerkin Schemes for Time-Dependent Radiative Transfer (2016)SIAM Journal on Numerical Analysis, 54(6), 3577. Egger, H. & Schlottbom, M.https://doi.org/10.1137/15M1051336A Biophysical Model for Cytotoxic Cell Swelling (2016)The Journal of neuroscience, 36(47), 11881-11890. Dijkstra, K., Hofmeijer, J., van Gils, S. A. & van Putten, M. J. A. M.https://doi.org/10.1523/JNEUROSCI.1934-16.2016An h-adaptive local discontinuous Galerkin method for the Navier-Stokes-Korteweg equations (2016)Journal of computational physics, 319, 242-265. Tian, L., Xu, Y., Kuerten, J. G. M. & van der Vegt, J. J. W.https://doi.org/10.1016/j.jcp.2016.05.027
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Continuous compliance compensation of position-dependent flexible structures (2016)In 12th IFAC Workshop on Adaptation and Learning in Control and Signal Processing, ALCOSP 2016 (pp. 76-81) (IFAC-PapersOnLine; Vol. 49). Elsevier. Kontaras, N., Heertjes, M. & Zwart, H.https://doi.org/10.1016/j.ifacol.2016.07.930
2015
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Relating systems properties of the wave and the Schrödinger equation (2015)Evolution equations and control theory, 4(2), 233-240. Zwart, H., Le Gorrec, Y. & Maschke, B.https://doi.org/10.3934/eect.2015.4.233Exploiting pallidal plasticity for stimulation in Parkinson’s disease (2015)Journal of neural engineering, 12(2), 026005. Lourens, M. A. J., Schwab, B., Nirody, J. A., Meijer, H. G. E. & van Gils, S. A.https://doi.org/10.1088/1741-2560/12/2/026005Tracking pattern evolution through extended center manifold reduction and singular perturbations (2015)Physica D, 298-299, 48-67. Sewalt, L., Doelman, A., Meijer, H. G. E., Rottschäfer, V. & Zagaris, A.https://doi.org/10.1016/j.physd.2015.01.006
2014
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Improved homoclinic predictor for Bogdanov-Takens bifurcation (2014)International journal of bifurcation and chaos in applied sciences and engineering, 24(4), 1450057. Kouznetsov, I. A., Meijer, H. G. E., Al Hdaibat, B. & Govaerts, W.https://doi.org/10.1142/S0218127414500576Travelling waves in a neural field model with refractoriness (2014)Journal of mathematical biology, 68(5), 1249-1268. Meijer, H. G. E. & Coombes, S.https://doi.org/10.1007/s00285-013-0670-x
2007
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Inverse operator of the generator of a C-0-semigroup (2007)Sbornik : mathematics, 198(7-8), 1095-1110. Gomilko, A., Zwart, H. & Tomilov, Y.https://doi.org/10.1070/SM2007v198n08ABEH003874
1991
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Computer simulation of oculomotor control in extrapyramidal disorders (1991)In Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society 1991 (pp. 2307-2308) (Proceedings of the Annual Conference on Engineering in Medicine and Biology; Vol. 13). IEEE. Bour, L. J., Wolzak, A., Van't Ent, D., Speelman, J. D. & Ongerboer de Visser, B. W.https://doi.org/10.1109/IEMBS.1991.685014